Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2219618 - 2219693 | Not Available |
| g/u mismatch-specific dna glycosylase | EXX23_10615 | Not Available | Positive | 2219818 - 2220324 | 18674.5 |
| rna polymerase sigma factor rpod | EXX23_10620 | Not Available | Negative | 2220403 - 2222244 | 70211.2 |
| dna primase | EXX23_10625 | Not Available | Negative | 2222439 - 2224184 | 65568.5 |
| 30s ribosomal protein s21 | EXX23_10630 | Not Available | Negative | 2224295 - 2224510 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EXX23_10635 | Not Available | Positive | 2224748 - 2225761 | 36010.5 |
| anion permease | EXX23_10640 | Not Available | Negative | 2225804 - 2227267 | 52852.5 |
| l(+)-tartrate dehydratase subunit beta | EXX23_10645 | Not Available | Negative | 2227315 - 2227920 | 22661.7 |
| l(+)-tartrate dehydratase subunit alpha | EXX23_10650 | Not Available | Negative | 2227917 - 2228828 | 32664.4 |
| dna-binding transcriptional activator ttdr | EXX23_10655 | Not Available | Positive | 2229035 - 2229967 | 35316.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





