Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2e,6e)-farnesyl diphosphate synthase | EXX23_10125 | Not Available | Negative | 2114771 - 2115670 | 32197.6 |
| exodeoxyribonuclease vii small subunit | EXX23_10130 | Not Available | Negative | 2115670 - 2115912 | 8952.42 |
| trna 4-thiouridine(8) synthase thii | EXX23_10135 | Not Available | Positive | 2116118 - 2117566 | 55050.4 |
| protein deglycase yajl | EXX23_10140 | Not Available | Negative | 2117620 - 2118210 | 20758.2 |
| 2-dehydropantoate 2-reductase | EXX23_10145 | Not Available | Negative | 2118173 - 2119084 | 33872.8 |
| yajq family cyclic di-gmp-binding protein | EXX23_10150 | Not Available | Positive | 2119252 - 2119743 | 18344.9 |
| mfs transporter | EXX23_10155 | Not Available | Negative | 2119871 - 2121235 | 48757.8 |
| protoheme ix farnesyltransferase | EXX23_10160 | Not Available | Negative | 2121384 - 2122274 | 32250.4 |
| cytochrome o ubiquinol oxidase subunit iv | EXX23_10165 | Not Available | Negative | 2122286 - 2122615 | 12030.2 |
| cytochrome o ubiquinol oxidase subunit iii | EXX23_10170 | Not Available | Negative | 2122615 - 2123229 | 22624.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





