Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3251 domain-containing protein | EXX23_10075 | Not Available | Negative | 2105071 - 2105610 | 19658.6 |
| transcriptional regulator nrdr | EXX23_10080 | Not Available | Positive | 2105761 - 2106210 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EXX23_10085 | Not Available | Positive | 2106214 - 2107317 | 40393.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | EXX23_10090 | Not Available | Positive | 2107406 - 2107876 | 16157.4 |
| transcription antitermination factor nusb | EXX23_10095 | Not Available | Positive | 2107896 - 2108315 | 15689.9 |
| thiamine-phosphate kinase | EXX23_10100 | Not Available | Positive | 2108393 - 2109370 | 35042.8 |
| phosphatidylglycerophosphatase a | EXX23_10105 | Not Available | Positive | 2109348 - 2109863 | 19332.2 |
| pentapeptide repeat-containing protein | EXX23_10110 | Not Available | Negative | 2110041 - 2111624 | 61195.4 |
| 1-deoxyxylulose-5-phosphate synthase yajo | EXX23_10115 | Not Available | Negative | 2111855 - 2112829 | 36407.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EXX23_10120 | Not Available | Negative | 2112884 - 2114746 | 67606.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





