Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2773 domain-containing protein | EXX23_09970 | Not Available | Positive | 2077490 - 2079769 | 86696.7 |
| recombination-associated protein rdgc | EXX23_09980 | Not Available | Negative | 2080299 - 2081210 | 33995.3 |
| fructokinase | EXX23_09985 | Not Available | Positive | 2081335 - 2082243 | 32511.6 |
| mfs transporter araj | EXX23_09990 | Not Available | Negative | 2082386 - 2083570 | 41943.1 |
| exonuclease subunit sbcc | EXX23_09995 | Not Available | Negative | 2083696 - 2086839 | 118635.0 |
| exonuclease subunit sbcd | EXX23_10000 | Not Available | Negative | 2086836 - 2088038 | 44774.1 |
| phosphate response regulator transcription factor phob | EXX23_10005 | Not Available | Positive | 2088228 - 2088917 | 26435.0 |
| phosphate regulon sensor histidine kinase phor | EXX23_10010 | Not Available | Positive | 2088975 - 2090270 | 49633.4 |
| branched-chain amino acid transporter carrier protein brnq | EXX23_10015 | Not Available | Positive | 2090677 - 2091996 | 46211.5 |
| proline-specific permease proy | EXX23_10020 | Not Available | Positive | 2092072 - 2093445 | 50218.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





