Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | EXX23_09870 | Not Available | Positive | 2057867 - 2058718 | 32411.3 |
| porphobilinogen synthase | EXX23_09875 | Not Available | Negative | 2058825 - 2059799 | 35626.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | EXX23_09880 | Not Available | Positive | 2060325 - 2063303 | 106658.0 |
| hydrogen peroxide resistance inhibitor ipra | EXX23_09885 | Not Available | Positive | 2063391 - 2064014 | 23957.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | EXX23_09890 | Not Available | Negative | 2064015 - 2065172 | 41851.5 |
| peptide antibiotic transporter sbma | EXX23_09895 | Not Available | Positive | 2065524 - 2066744 | 46461.9 |
| surface-exposed outer membrane lipoprotein yaiw | EXX23_09900 | Not Available | Positive | 2066757 - 2067851 | 40412.5 |
| duf2755 family protein | EXX23_09905 | Not Available | Negative | 2067910 - 2068218 | 11425.2 |
| duf2754 domain-containing protein | EXX23_09910 | Not Available | Positive | 2068478 - 2068690 | 8097.92 |
| d-alanine--d-alanine ligase a | EXX23_09915 | Not Available | Negative | 2068714 - 2069808 | 39318.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





