Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | EXX23_08560 | Not Available | Positive | 1770515 - 1771570 | 37199.2 |
| long polar fimbrial protein lpfe | EXX23_08565 | Not Available | Positive | 1771575 - 1772105 | 18466.7 |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | EXX23_08570 | Not Available | Positive | 1772360 - 1774051 | 63807.0 |
| Trna-pro | Not Available | Not Available | Positive | 1774143 - 1774219 | Not Available |
| abc transporter substrate-binding protein | EXX23_08580 | Not Available | Positive | 1774972 - 1776579 | 60296.8 |
| hypothetical protein | EXX23_08585 | Not Available | Negative | 1776552 - 1776767 | 7925.49 |
| dipeptide abc transporter permease dppb | EXX23_08590 | Not Available | Positive | 1776730 - 1777749 | 37481.4 |
| dipeptide abc transporter permease dppc | EXX23_08595 | Not Available | Positive | 1777759 - 1778661 | 32310.5 |
| dipeptide abc transporter atp-binding protein | EXX23_08600 | Not Available | Positive | 1778672 - 1779655 | 35846.5 |
| abc transporter atp-binding protein | EXX23_08605 | Not Available | Positive | 1779652 - 1780656 | 37520.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





