Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_25 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317644 bp
Thymine Count
1318563 bp
Guanine Count
1359669 bp
Cytosine Count
1319404 bp
Genome Length
5315401 bp
Protein-coding Genes
4795 genes
Non-Coding Genes
303 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX23_08460 | Not Available | Positive | 1750740 - 1751081 | 12553.0 |
| yiab family inner membrane protein | EXX23_08465 | Not Available | Positive | 1751127 - 1751564 | 16123.6 |
| acyltransferase | EXX23_08470 | Not Available | Negative | 1751606 - 1752601 | 37602.1 |
| hypothetical protein | EXX23_08475 | Not Available | Positive | 1752776 - 1753075 | 11340.8 |
| glycine--trna ligase subunit alpha | EXX23_08480 | Not Available | Positive | 1753170 - 1754081 | 34718.2 |
| glycine--trna ligase subunit beta | EXX23_08485 | Not Available | Positive | 1754091 - 1756160 | 76817.2 |
| type i toxin-antitoxin system toxin hoka | EXX23_08490 | Not Available | Positive | 1756483 - 1756614 | 5140.5 |
| rna chaperone/antiterminator cspa | EXX23_08495 | Not Available | Negative | 1756822 - 1757034 | 7403.66 |
| hth-type transcriptional regulator | EXX23_08500 | Not Available | Negative | 1757315 - 1757605 | 11033.5 |
| duf3053 domain-containing protein | EXX23_08505 | Not Available | Positive | 1758039 - 1758749 | 25664.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





