Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase/prephenate dehydrogenase | EXX55_22830 | Not Available | Negative | 4661520 - 4662641 | 42000.9 |
| 3-deoxy-7-phosphoheptulonate synthase arof | EXX55_22835 | Not Available | Negative | 4662652 - 4663722 | 38762.2 |
| duf2799 domain-containing protein | EXX55_22840 | Not Available | Positive | 4663932 - 4664297 | 13174.3 |
| duf4154 domain-containing protein | EXX55_22845 | Not Available | Positive | 4664447 - 4664965 | 18979.2 |
| diguanylate cyclase dgcn | EXX55_22850 | Not Available | Positive | 4664955 - 4666181 | 45832.0 |
| ompa family protein | EXX55_22855 | Not Available | Positive | 4666197 - 4666679 | 17259.6 |
| 50s ribosomal protein l19 | EXX55_22860 | Not Available | Negative | 4666756 - 4667103 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EXX55_22865 | Not Available | Negative | 4667145 - 4667912 | 28424.0 |
| ribosome maturation factor rimm | EXX55_22870 | Not Available | Negative | 4667943 - 4668491 | 20606.6 |
| 30s ribosomal protein s16 | EXX55_22875 | Not Available | Negative | 4668510 - 4668758 | 9191.08 |
Pathways
842 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





