Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXX55_22000 | Not Available | Positive | 4497093 - 4498019 | 34360.5 |
| lysr family transcriptional regulator | EXX55_22005 | Not Available | Positive | 4498220 - 4499113 | 33243.1 |
| aldo/keto reductase | EXX55_22010 | Not Available | Negative | 4499144 - 4500133 | 36255.5 |
| aldo/keto reductase | EXX55_22015 | Not Available | Negative | 4500160 - 4501011 | 31822.1 |
| glutamate racemase | EXX55_22025 | Not Available | Negative | 4502865 - 4503722 | 31075.8 |
| trna (uridine(54)-c5)-methyltransferase trma | EXX55_22035 | Not Available | Positive | 4505918 - 4507018 | 41937.3 |
| yijd family membrane protein | EXX55_22040 | Not Available | Negative | 4507058 - 4507417 | 13024.3 |
| hth-type transcriptional repressor fabr | EXX55_22045 | Not Available | Negative | 4507417 - 4508067 | 24536.5 |
| mfs transporter | EXX55_22050 | Not Available | Negative | 4508171 - 4509487 | 47025.4 |
| amidohydrolase | EXX55_22055 | Not Available | Negative | 4509530 - 4510696 | 42205.6 |
Pathways
932 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





