Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory sulfurtransferase fdhd | EXX55_21485 | Not Available | Negative | 4392508 - 4393341 | 30533.8 |
| sulfate abc transporter substrate-binding protein | EXX55_21490 | Not Available | Positive | 4393535 - 4394122 | 21369.5 |
| formate dehydrogenase-n subunit alpha | EXX55_21495 | Not Available | Positive | 4394171 - 4396585 | 89604.2 |
| formate dehydrogenase subunit beta | EXX55_21500 | Not Available | Positive | 4396598 - 4397500 | 33102.1 |
| formate dehydrogenase cytochrome b556 subunit | EXX55_21505 | Not Available | Positive | 4397497 - 4398132 | 24581.6 |
| formate dehydrogenase accessory protein fdhe | EXX55_21510 | Not Available | Positive | 4398129 - 4399058 | 34660.5 |
| hypothetical protein | EXX55_21515 | Not Available | Negative | 4399388 - 4399630 | 9378.09 |
| copg family transcriptional regulator | EXX55_21520 | Not Available | Negative | 4399849 - 4400067 | 8424.19 |
| hypothetical protein | EXX55_21525 | Not Available | Positive | 4400351 - 4400569 | 8225.87 |
| helix-turn-helix domain-containing protein | EXX55_21530 | Not Available | Negative | 4400651 - 4400941 | 10847.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





