Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX55_21235 | Not Available | Positive | 4346981 - 4347034 | 2056.38 |
| trna epoxyqueuosine(34) reductase queg | EXX55_21240 | Not Available | Negative | 4347017 - 4348156 | 43049.4 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | EXX55_21245 | Not Available | Positive | 4348155 - 4349702 | 54527.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EXX55_21250 | Not Available | Positive | 4349674 - 4350135 | 16854.0 |
| n-acetylmuramoyl-l-alanine amidase amib | EXX55_21255 | Not Available | Positive | 4350154 - 4351491 | 47990.9 |
| dna mismatch repair endonuclease mutl | EXX55_21260 | Not Available | Positive | 4351501 - 4353348 | 67866.5 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EXX55_21265 | Not Available | Positive | 4353341 - 4354291 | 35081.2 |
| rna chaperone hfq | EXX55_21270 | Not Available | Positive | 4354377 - 4354685 | 11167.0 |
| gtpase hflx | EXX55_21275 | Not Available | Positive | 4354762 - 4356042 | 48329.0 |
| ftsh protease activity modulator hflk | EXX55_21280 | Not Available | Positive | 4356128 - 4357387 | 45547.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





