Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase (quinol) flavoprotein subunit | EXX55_21185 | Not Available | Negative | 4335179 - 4336987 | 65975.5 |
| elongation factor p--(r)-beta-lysine ligase | EXX55_21190 | Not Available | Positive | 4337312 - 4338289 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | EXX55_21195 | Not Available | Positive | 4338508 - 4340010 | 54656.1 |
| miniconductance mechanosensitive channel mscm | EXX55_21200 | Not Available | Negative | 4340161 - 4343484 | 123962.0 |
| phosphatidylserine decarboxylase | EXX55_21205 | Not Available | Negative | 4343506 - 4344474 | 35936.4 |
| small ribosomal subunit biogenesis gtpase rsga | EXX55_21210 | Not Available | Negative | 4344571 - 4345623 | 39229.5 |
| oligoribonuclease | EXX55_21215 | Not Available | Positive | 4345718 - 4346263 | 20816.8 |
| Trna-gly | Not Available | Not Available | Positive | 4346474 - 4346549 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4346561 - 4346636 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4346672 - 4346747 | Not Available |
Pathways
846 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





