Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin hicb | EXX55_20975 | Not Available | Positive | 4298085 - 4298501 | 15247.5 |
| plp-dependent aminotransferase family protein | EXX55_20980 | Not Available | Positive | 4298580 - 4299986 | 52823.9 |
| extracellular solute-binding protein | EXX55_20985 | Not Available | Positive | 4300231 - 4301376 | 42273.2 |
| abc transporter atp-binding protein | EXX55_20990 | Not Available | Positive | 4301394 - 4302407 | 37033.9 |
| abc transporter permease | EXX55_21000 | Not Available | Positive | 4303338 - 4304132 | 28731.5 |
| aminobutyraldehyde dehydrogenase | EXX55_21005 | Not Available | Positive | 4304154 - 4305578 | 50857.9 |
| stress response membrane protein yncl | EXX55_21010 | Not Available | Negative | 4305675 - 4305770 | 3490.44 |
| ghot/ortt family toxin | EXX55_21015 | Not Available | Positive | 4305965 - 4306138 | 6646.44 |
| duf2526 domain-containing protein | EXX55_21020 | Not Available | Positive | 4306224 - 4306457 | 8800.41 |
| dmt family transporter | EXX55_21025 | Not Available | Negative | 4306458 - 4306907 | 15824.0 |
Pathways
899 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





