Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | EXX55_20870 | Not Available | Positive | 4278564 - 4280003 | 52269.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EXX55_20875 | Not Available | Negative | 4280045 - 4281046 | 35749.7 |
| cytochrome b561 | EXX55_20880 | Not Available | Positive | 4281235 - 4281765 | 20287.7 |
| hypothetical protein | EXX55_20885 | Not Available | Positive | 4282010 - 4282183 | 5860.19 |
| type i toxin-antitoxin system hok family toxin | EXX55_20890 | Not Available | Negative | 4282255 - 4282404 | 5645.21 |
| methyl-accepting chemotaxis protein trg | EXX55_20900 | Not Available | Positive | 4282793 - 4284433 | 58911.4 |
| lysr family transcriptional regulator | EXX55_20905 | Not Available | Negative | 4284471 - 4285394 | 33465.6 |
| voc family protein | EXX55_20910 | Not Available | Positive | 4285611 - 4286954 | 50987.5 |
| glucan biosynthesis protein d | EXX55_20915 | Not Available | Positive | 4287179 - 4288834 | 62771.2 |
| duf465 domain-containing protein | EXX55_20920 | Not Available | Positive | 4288974 - 4289198 | 8878.79 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





