Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| irad leader peptide | EXX55_20665 | Not Available | Positive | 4231306 - 4231389 | 3016.48 |
| anti-adapter protein irad | EXX55_20670 | Not Available | Positive | 4231386 - 4231778 | 14819.7 |
| hypochlorite stress dna-binding transcriptional regulator hypt | EXX55_20675 | Not Available | Negative | 4231771 - 4232682 | 34698.6 |
| beta-aspartyl-peptidase | EXX55_20680 | Not Available | Negative | 4232747 - 4233919 | 41059.3 |
| hypothetical protein | EXX55_20685 | Not Available | Negative | 4233932 - 4234393 | 16194.5 |
| hypothetical protein | EXX55_20690 | Not Available | Negative | 4234390 - 4235073 | 23794.8 |
| rna 2'-phosphotransferase | EXX55_20695 | Not Available | Positive | 4235323 - 4235877 | 20530.7 |
| mfs transporter | EXX55_20700 | Not Available | Negative | 4235890 - 4237068 | 41333.1 |
| hypothetical protein | EXX55_20705 | Not Available | Negative | 4237136 - 4237996 | 32011.2 |
| duf3343 domain-containing protein | EXX55_20710 | Not Available | Negative | 4238061 - 4238318 | 9554.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





