Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone fimc | EXX55_20615 | Not Available | Positive | 4218767 - 4219492 | 26660.5 |
| fimbrial biogenesis outer membrane usher protein | EXX55_20620 | Not Available | Positive | 4219559 - 4222195 | 96504.8 |
| type 1 fimbrial protein | EXX55_20625 | Not Available | Positive | 4222205 - 4222735 | 18700.3 |
| type 1 fimbrial protein | EXX55_20630 | Not Available | Positive | 4222748 - 4223251 | 17304.2 |
| fimbrial protein | EXX55_20635 | Not Available | Positive | 4223271 - 4224173 | 31502.2 |
| gluconate transporter gntp | EXX55_20640 | Not Available | Negative | 4224346 - 4225689 | 47141.0 |
| mannonate dehydratase | EXX55_20645 | Not Available | Positive | 4226029 - 4227213 | 44826.5 |
| fructuronate reductase | EXX55_20650 | Not Available | Positive | 4227294 - 4228754 | 53659.3 |
| uxu operon transcriptional regulator | EXX55_20655 | Not Available | Positive | 4228969 - 4229742 | 29309.9 |
| duf2686 family protein | EXX55_20660 | Not Available | Negative | 4229883 - 4230713 | 30735.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





