Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | EXX55_20560 | Not Available | Positive | 4200486 - 4206827 | 238215.0 |
| atp-dependent helicase | EXX55_20565 | Not Available | Positive | 4206824 - 4208938 | 79412.0 |
| hypothetical protein | EXX55_20570 | Not Available | Negative | 4209452 - 4210102 | 24393.8 |
| sialate o-acetylesterase | EXX55_20580 | Not Available | Negative | 4211076 - 4212056 | 36851.9 |
| yjht family mutarotase | EXX55_20585 | Not Available | Negative | 4212121 - 4213227 | 39561.3 |
| n-acetylneuraminic acid outer membrane channel protein nanc | EXX55_20590 | Not Available | Negative | 4213247 - 4213963 | 27889.4 |
| type 1 fimbriae regulatory protein fimb | EXX55_20595 | Not Available | Positive | 4215415 - 4216017 | 22994.8 |
| tyrosine recombinase | EXX55_20600 | Not Available | Positive | 4216494 - 4217090 | 23159.7 |
| type 1 fimbrial protein subunit fima | EXX55_20605 | Not Available | Positive | 4217572 - 4218126 | 18624.9 |
| type 1 fimbrial protein | EXX55_20610 | Not Available | Positive | 4218191 - 4218730 | 19374.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





