Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter permease lsrd | EXX55_20400 | Not Available | Positive | 4161013 - 4162005 | 34474.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | EXX55_20405 | Not Available | Positive | 4162017 - 4163039 | 36712.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | EXX55_20410 | Not Available | Positive | 4163066 - 4163941 | 31866.6 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | EXX55_20415 | Not Available | Positive | 4163965 - 4164255 | 11255.4 |
| trans-aconitate 2-methyltransferase | EXX55_20420 | Not Available | Positive | 4164312 - 4165070 | 29003.4 |
| hypothetical protein | EXX55_20425 | Not Available | Negative | 4165074 - 4165988 | 34723.9 |
| tagaturonate reductase | EXX55_20430 | Not Available | Negative | 4166185 - 4167636 | 54811.3 |
| ggdef domain-containing protein | EXX55_20435 | Not Available | Negative | 4167863 - 4168810 | 34338.3 |
| hypothetical protein | EXX55_20445 | Not Available | Positive | 4169305 - 4169592 | 10381.0 |
| duf905 domain-containing protein | EXX55_20450 | Not Available | Positive | 4169598 - 4169831 | 8775.41 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





