Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | EXX55_20335 | Not Available | Negative | 4142549 - 4145200 | 96692.3 |
| fimbrial chaperone protein fimc | EXX55_20340 | Not Available | Negative | 4145242 - 4145952 | 26107.7 |
| fimbrial protein | EXX55_20345 | Not Available | Negative | 4146313 - 4146876 | 19172.6 |
| type ii toxin-antitoxin system hipa family toxin | EXX55_20360 | Not Available | Negative | 4147850 - 4149172 | 49365.8 |
| type ii toxin-antitoxin system antitoxin hipb | EXX55_20365 | Not Available | Negative | 4149172 - 4149438 | 10033.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | EXX55_20370 | Not Available | Negative | 4149649 - 4151049 | 50456.6 |
| autoinducer-2 kinase | EXX55_20380 | Not Available | Negative | 4155583 - 4157175 | 57553.1 |
| transcriptional regulator lsrr | EXX55_20385 | Not Available | Negative | 4157254 - 4158207 | 33828.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | EXX55_20390 | Not Available | Positive | 4158456 - 4159991 | 55799.6 |
| autoinducer 2 abc transporter permease lsrc | EXX55_20395 | Not Available | Positive | 4159985 - 4161013 | 36397.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





