Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein subunit fima | EXX55_19725 | Not Available | Positive | 4039313 - 4039855 | 18475.5 |
| molecular chaperone fimc | EXX55_19730 | Not Available | Positive | 4040075 - 4040767 | 25459.1 |
| fimbrial biogenesis outer membrane usher protein | EXX55_19735 | Not Available | Positive | 4040798 - 4043407 | 96032.6 |
| type 1 fimbrin d-mannose specific adhesin fimh | EXX55_19740 | Not Available | Positive | 4043420 - 4044427 | 36632.1 |
| fimbriae assembly protein | EXX55_19745 | Not Available | Positive | 4044438 - 4044953 | 18223.7 |
| fimbriae biosynthesis transcriptional regulator fimz | EXX55_19750 | Not Available | Negative | 4044956 - 4045588 | 23678.9 |
| Trna-arg | Not Available | Not Available | Positive | 4045831 - 4045907 | Not Available |
| tautomerase ppta | EXX55_20115 | Not Available | Positive | 4089730 - 4089957 | 8518.25 |
| flavin reductase family protein | EXX55_20120 | Not Available | Negative | 4089961 - 4090530 | 20969.2 |
| n-hydroxyarylamine o-acetyltransferase | EXX55_20125 | Not Available | Positive | 4090703 - 4091548 | 32190.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





