Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-3-oxopropionate reductase | EXX55_19625 | Not Available | Positive | 4017743 - 4018621 | 30798.4 |
| putative allantoin permease | EXX55_19630 | Not Available | Positive | 4018790 - 4020244 | 52449.2 |
| allantoinase allb | EXX55_19635 | Not Available | Positive | 4020304 - 4021665 | 49573.4 |
| uracil/xanthine transporter | EXX55_19640 | Not Available | Positive | 4021722 - 4023023 | 47242.2 |
| glycerate 3-kinase | EXX55_19645 | Not Available | Positive | 4023045 - 4024190 | 38835.1 |
| (s)-ureidoglycine aminohydrolase | EXX55_19650 | Not Available | Negative | 4024418 - 4025203 | 28720.1 |
| allantoate amidohydrolase | EXX55_19655 | Not Available | Negative | 4025214 - 4026449 | 45631.4 |
| ureidoglycolate dehydrogenase | EXX55_19660 | Not Available | Negative | 4026471 - 4027520 | 37893.2 |
| acyl-coa synthetase fdra | EXX55_19665 | Not Available | Positive | 4027837 - 4029504 | 58580.3 |
| duf1116 domain-containing protein | EXX55_19670 | Not Available | Positive | 4029514 - 4030773 | 44911.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





