Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytfj family protein | EXX55_19520 | Not Available | Positive | 3995689 - 3996243 | 20406.7 |
| hypothetical protein | EXX55_19525 | Not Available | Negative | 3996306 - 3997244 | 35835.7 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | EXX55_19530 | Not Available | Negative | 3997456 - 3998196 | 27204.4 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | EXX55_19535 | Not Available | Positive | 3998386 - 4000329 | 70835.9 |
| transcriptional regulator | EXX55_19540 | Not Available | Negative | 4000447 - 4000827 | 14076.0 |
| nad(p)h:quinone oxidoreductase | EXX55_19545 | Not Available | Positive | 4000916 - 4001776 | 29809.3 |
| dmt family transporter | EXX55_19550 | Not Available | Positive | 4001884 - 4002849 | 35210.6 |
| iron-sulfur cluster repair protein ytfe | EXX55_19555 | Not Available | Positive | 4002957 - 4003619 | 24884.1 |
| d-serine/d-alanine/glycine transporter | EXX55_19560 | Not Available | Negative | 4003664 - 4005076 | 51662.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EXX55_19565 | Not Available | Negative | 4005385 - 4006005 | 22217.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





