Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | EXX55_19420 | Not Available | Positive | 3972268 - 3974406 | 80027.0 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | EXX55_19425 | Not Available | Positive | 3974564 - 3975028 | 17446.9 |
| cytochrome b562 | EXX55_19430 | Not Available | Negative | 3975073 - 3975459 | 14005.7 |
| metalloprotease pmba | EXX55_19435 | Not Available | Negative | 3975643 - 3976995 | 48372.4 |
| ribosome-associated protein | EXX55_19440 | Not Available | Positive | 3977089 - 3977640 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EXX55_19445 | Not Available | Negative | 3977796 - 3979169 | 49882.0 |
| class 1 fructose-bisphosphatase | EXX55_19450 | Not Available | Positive | 3979345 - 3980343 | 36836.0 |
| sugar abc transporter permease yjff | EXX55_19455 | Not Available | Negative | 3980376 - 3981371 | 34994.0 |
| abc transporter permease | EXX55_19460 | Not Available | Negative | 3981358 - 3982380 | 35530.1 |
| sugar abc transporter atp-binding protein | EXX55_19465 | Not Available | Negative | 3982394 - 3983896 | 55250.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





