Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent aldehyde reductase ahr | EXX55_19270 | Not Available | Positive | 3938771 - 3939790 | 36431.9 |
| gluconokinase | EXX55_19275 | Not Available | Negative | 3939794 - 3940357 | 21058.2 |
| l-idonate 5-dehydrogenase | EXX55_19280 | Not Available | Positive | 3940574 - 3941605 | 37148.7 |
| gluconate 5-dehydrogenase | EXX55_19285 | Not Available | Positive | 3941629 - 3942393 | 27550.3 |
| gnt-ii system l-idonate transporter | EXX55_19290 | Not Available | Positive | 3942455 - 3943774 | 46044.2 |
| dna-binding transcriptional regulator idnr | EXX55_19295 | Not Available | Positive | 3943841 - 3944839 | 37569.5 |
| duf853 domain-containing protein | EXX55_19300 | Not Available | Positive | 3944917 - 3946419 | 54265.4 |
| lipopolysaccharide abc transporter permease lptg | EXX55_19305 | Not Available | Negative | 3946580 - 3947662 | 39621.0 |
| lipopolysaccharide abc transporter permease lptf | EXX55_19310 | Not Available | Negative | 3947662 - 3948762 | 40360.1 |
| leucyl aminopeptidase | EXX55_19315 | Not Available | Positive | 3949029 - 3950540 | 54883.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





