Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EXX55_19195 | Not Available | Positive | 3927465 - 3927722 | 9761.8 |
| type 1 fimbrial protein | EXX55_19200 | Not Available | Positive | 3927767 - 3928300 | 18458.5 |
| type 1 fimbrial protein | EXX55_19205 | Not Available | Positive | 3928386 - 3928973 | 21887.3 |
| papc/fimd family outer membrane usher protein | EXX55_19210 | Not Available | Positive | 3929145 - 3931604 | 90537.4 |
| molecular chaperone | EXX55_19215 | Not Available | Positive | 3931673 - 3932404 | 26879.6 |
| nuclease pin | EXX55_19220 | Not Available | Positive | 3932441 - 3933004 | 20818.7 |
| fimbrial protein | EXX55_19225 | Not Available | Positive | 3933088 - 3933606 | 18721.4 |
| nuclease pin | EXX55_19230 | Not Available | Positive | 3933629 - 3934621 | 35332.6 |
| duf4102 domain-containing protein | EXX55_19255 | Not Available | Negative | 3937039 - 3938304 | 48161.0 |
| Trna-leu | Not Available | Not Available | Positive | 3938491 - 3938575 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





