Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter | EXX55_19090 | Not Available | Positive | 3902540 - 3904189 | 60527.5 |
| pentapeptide repeat-containing protein | EXX55_19095 | Not Available | Negative | 3904343 - 3905635 | 49396.1 |
| cation/acetate symporter actp | EXX55_19100 | Not Available | Negative | 3905813 - 3907462 | 59227.8 |
| duf485 domain-containing protein | EXX55_19105 | Not Available | Negative | 3907459 - 3907773 | 11672.3 |
| acetate--coa ligase | EXX55_19110 | Not Available | Negative | 3907975 - 3909933 | 72083.5 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | EXX55_19115 | Not Available | Positive | 3910326 - 3911762 | 53735.7 |
| cytochrome c nitrite reductase pentaheme subunit | EXX55_19120 | Not Available | Positive | 3911807 - 3912373 | 20705.6 |
| cytochrome c nitrite reductase fe-s protein | EXX55_19125 | Not Available | Positive | 3912370 - 3913041 | 24568.8 |
| cytochrome c nitrite reductase subunit nrfd | EXX55_19130 | Not Available | Positive | 3913038 - 3913994 | 35070.4 |
| heme lyase ccmf/nrfe family subunit | EXX55_19135 | Not Available | Positive | 3914014 - 3915732 | 63608.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





