Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbq family protein | EXX55_19040 | Not Available | Positive | 3891949 - 3892365 | 15656.8 |
| mmcq/yjbr family dna-binding protein | EXX55_19045 | Not Available | Positive | 3892369 - 3892725 | 13520.2 |
| excinuclease abc subunit uvra | EXX55_19050 | Not Available | Negative | 3892760 - 3895582 | 103874.0 |
| single-stranded dna-binding protein ssb1 | EXX55_19055 | Not Available | Positive | 3895837 - 3896373 | 18976.1 |
| hypothetical protein | EXX55_19060 | Not Available | Negative | 3896575 - 3897051 | 18331.8 |
| hypothetical protein | EXX55_19065 | Not Available | Negative | 3897322 - 3897603 | 10336.0 |
| c-di-gmp phosphodiesterase pdec | EXX55_19070 | Not Available | Positive | 3898032 - 3899618 | 60676.5 |
| superoxide response transcriptional regulator soxs | EXX55_19075 | Not Available | Negative | 3899621 - 3899944 | 12911.6 |
| redox-sensitive transcriptional activator soxr | EXX55_19080 | Not Available | Positive | 3900030 - 3900494 | 17136.7 |
| ncs2 family permease | EXX55_19085 | Not Available | Positive | 3901040 - 3902389 | 45714.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





