Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | EXX55_18780 | Not Available | Positive | 3831000 - 3832601 | 60274.9 |
| isocitrate lyase | EXX55_18785 | Not Available | Positive | 3832631 - 3833935 | 47510.0 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | EXX55_18790 | Not Available | Positive | 3834119 - 3835855 | 67727.5 |
| shet2/espl2 family type iii secretion system effector toxin | EXX55_18795 | Not Available | Negative | 3835824 - 3838010 | 82596.9 |
| glyoxylate bypass operon transcriptional repressor iclr | EXX55_18800 | Not Available | Negative | 3838327 - 3839151 | 29741.1 |
| methionine synthase | EXX55_18805 | Not Available | Positive | 3839351 - 3843034 | 136088.0 |
| na/pi cotransporter family protein | EXX55_18810 | Not Available | Positive | 3843254 - 3844885 | 59479.7 |
| dipeptidase pepe | EXX55_18815 | Not Available | Negative | 3844975 - 3845664 | 24629.7 |
| l-sorbose 1-phosphate reductase | EXX55_18820 | Not Available | Negative | 3846046 - 3847275 | 44721.1 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EXX55_18825 | Not Available | Negative | 3847327 - 3848151 | 29499.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





