Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX55_18415 | Not Available | Negative | 3774983 - 3775066 | 3206.2 |
| acid shock protein | EXX55_18420 | Not Available | Negative | 3775159 - 3775494 | 11538.0 |
| mfs transporter | EXX55_18425 | Not Available | Negative | 3775891 - 3777144 | 45246.2 |
| lysr family transcriptional regulator | EXX55_18430 | Not Available | Positive | 3777251 - 3778144 | 33297.4 |
| dna-binding transcriptional repressor mlc | EXX55_18435 | Not Available | Positive | 3778279 - 3779499 | 44302.8 |
| atp-dependent dethiobiotin synthetase biod | EXX55_18440 | Not Available | Positive | 3779624 - 3780319 | 24982.5 |
| voltage-gated clc-type chloride channel clcb | EXX55_18445 | Not Available | Negative | 3780272 - 3781564 | 45695.0 |
| tat proofreading chaperone dmsd | EXX55_18450 | Not Available | Negative | 3781723 - 3782337 | 23414.9 |
| dimethyl sulfoxide reductase anchor subunit | EXX55_18455 | Not Available | Negative | 3782380 - 3783234 | 30488.5 |
| dimethylsulfoxide reductase subunit b | EXX55_18460 | Not Available | Negative | 3783236 - 3783853 | 22752.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





