Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronide transporter | EXX55_18315 | Not Available | Positive | 3752760 - 3754133 | 49939.0 |
| glucuronide uptake porin uidc | EXX55_18320 | Not Available | Positive | 3754172 - 3755437 | 46586.2 |
| duf945 domain-containing protein | EXX55_18325 | Not Available | Negative | 3755482 - 3756990 | 54696.1 |
| mannose-6-phosphate isomerase | EXX55_18330 | Not Available | Negative | 3757091 - 3758266 | 42810.3 |
| fumarate hydratase | EXX55_18335 | Not Available | Positive | 3758465 - 3760111 | 60302.0 |
| class ii fumarate hydratase | EXX55_18340 | Not Available | Positive | 3760254 - 3761657 | 50500.9 |
| dna replication terminus site-binding protein | EXX55_18345 | Not Available | Negative | 3761654 - 3762583 | 35743.1 |
| two-component system sensor histidine kinase rstb | EXX55_18350 | Not Available | Negative | 3762659 - 3763960 | 49313.8 |
| two-component system response regulator rsta | EXX55_18355 | Not Available | Negative | 3763964 - 3764683 | 26705.4 |
| glpm family protein | EXX55_18360 | Not Available | Positive | 3764813 - 3765148 | 12323.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





