Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system coupling protein trad | EXX55_17590 | Not Available | Negative | 3618471 - 3620588 | 77991.7 |
| restriction endonuclease | EXX55_17605 | Not Available | Negative | 3621078 - 3621668 | 22628.8 |
| integrating conjugative element protein | EXX55_17610 | Not Available | Negative | 3621668 - 3622195 | 18284.3 |
| transglycosylase | EXX55_17615 | Not Available | Negative | 3622192 - 3622848 | 24277.4 |
| tigr03759 family integrating conjugative element protein | EXX55_17620 | Not Available | Negative | 3622827 - 3623546 | 26676.7 |
| hypothetical protein | EXX55_17625 | Not Available | Negative | 3623551 - 3624330 | 27379.9 |
| pilus assembly protein pill | EXX55_17630 | Not Available | Negative | 3624327 - 3624905 | 20733.3 |
| transposase | EXX55_17635 | Not Available | Negative | 3625096 - 3625344 | 9274.01 |
| rpn family recombination-promoting nuclease/putative transposase | EXX55_17640 | Not Available | Negative | 3625478 - 3626419 | 35726.8 |
| single-stranded dna-binding protein | EXX55_17645 | Not Available | Negative | 3626493 - 3627050 | 19941.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





