Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | EXX55_17335 | Not Available | Positive | 3580276 - 3581562 | 48219.2 |
| type iv pilus biogenesis protein pilp | EXX55_17340 | Not Available | Positive | 3581552 - 3582013 | 16516.7 |
| type ii secretion protein e | EXX55_17345 | Not Available | Positive | 3582023 - 3583543 | 56689.9 |
| type ii secretion protein f | EXX55_17350 | Not Available | Positive | 3583545 - 3584645 | 41374.0 |
| prepilin-type cleavage/methylation domain-containing protein | EXX55_17355 | Not Available | Positive | 3584695 - 3585231 | 19422.2 |
| lytic transglycosylase | EXX55_17360 | Not Available | Positive | 3585290 - 3585766 | 18118.3 |
| prepilin peptidase | EXX55_17365 | Not Available | Positive | 3585779 - 3586429 | 23512.7 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | EXX55_17370 | Not Available | Positive | 3586426 - 3587628 | 43398.8 |
| pilus assembly protein pilv | EXX55_17375 | Not Available | Negative | 3587665 - 3587856 | 6884.08 |
| hypothetical protein | EXX55_17380 | Not Available | Positive | 3588005 - 3588253 | 8403.69 |
Pathways
891 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





