Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dha2 family efflux mfs transporter permease subunit | EXX55_17130 | Not Available | Negative | 3540824 - 3542251 | 51464.9 |
| fadr family transcriptional regulator | EXX55_17135 | Not Available | Negative | 3542274 - 3542966 | 26077.5 |
| agmatinase | EXX55_17140 | Not Available | Negative | 3543560 - 3544480 | 33558.9 |
| hypothetical protein | EXX55_17145 | Not Available | Negative | 3544616 - 3545347 | 26387.8 |
| biosynthetic arginine decarboxylase | EXX55_17150 | Not Available | Negative | 3545493 - 3547469 | 73890.6 |
| acid stress response protein yqgb | EXX55_17155 | Not Available | Negative | 3547478 - 3547609 | 4859.08 |
| hypothetical protein | EXX55_17160 | Not Available | Positive | 3547745 - 3547960 | 8114.98 |
| duf2684 family protein | EXX55_17165 | Not Available | Negative | 3547957 - 3548208 | 9562.84 |
| methionine adenosyltransferase | EXX55_17170 | Not Available | Positive | 3548264 - 3549418 | 41954.0 |
| sugar porter family mfs transporter | EXX55_17175 | Not Available | Positive | 3549855 - 3551249 | 50985.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





