Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase dacd | EXX55_16605 | Not Available | Positive | 3431797 - 3432963 | 43348.5 |
| dna gyrase inhibitor sbmc | EXX55_16610 | Not Available | Positive | 3433082 - 3433555 | 18082.4 |
| fusc family protein | EXX55_16615 | Not Available | Positive | 3433754 - 3434812 | 39972.7 |
| duf496 family protein | EXX55_16620 | Not Available | Positive | 3434984 - 3435313 | 12778.5 |
| ethanolamine utilization protein | EXX55_16625 | Not Available | Negative | 3435414 - 3435596 | 6488.86 |
| duf957 domain-containing protein | EXX55_16635 | Not Available | Negative | 3436085 - 3436198 | 4241.28 |
| hypothetical protein | EXX55_16640 | Not Available | Negative | 3436211 - 3436405 | 6959.16 |
| type iv toxin-antitoxin system yeeu family antitoxin | EXX55_16650 | Not Available | Negative | 3436864 - 3437232 | 13671.2 |
| duf987 family protein | EXX55_16655 | Not Available | Negative | 3437395 - 3437532 | 5144.09 |
| inverse autotransporter adhesin eaex/air | EXX55_16660 | Not Available | Negative | 3437533 - 3441653 | 146446.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





