Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXX55_15850 | Not Available | Negative | 3269744 - 3270625 | 32725.7 |
| yeih family protein | EXX55_15855 | Not Available | Positive | 3270724 - 3271773 | 36884.3 |
| deoxyribonuclease iv | EXX55_15860 | Not Available | Positive | 3271847 - 3272704 | 31463.2 |
| sugar kinase | EXX55_15865 | Not Available | Positive | 3272707 - 3273795 | 39618.5 |
| nupc/nupg family nucleoside cnt transporter | EXX55_15870 | Not Available | Negative | 3273851 - 3275101 | 43426.3 |
| ribosylpyrimidine nucleosidase | EXX55_15875 | Not Available | Negative | 3275201 - 3276142 | 33768.1 |
| transcriptional regulator yeil | EXX55_15880 | Not Available | Positive | 3276272 - 3276970 | 26850.6 |
| nupc/nupg family nucleoside cnt transporter | EXX55_15885 | Not Available | Negative | 3277038 - 3278288 | 43464.5 |
| pseudouridine-5'-phosphate glycosidase | EXX55_15890 | Not Available | Negative | 3278382 - 3279320 | 32947.8 |
| pseudouridine kinase | EXX55_15895 | Not Available | Negative | 3279308 - 3280249 | 33674.9 |
Pathways
612 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





