Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX55_09200 | Not Available | Negative | 1879705 - 1880244 | 20550.5 |
| dna-binding transcriptional activator tdcr | EXX55_09205 | Not Available | Negative | 1880500 - 1880844 | 13553.3 |
| transcriptional regulator tdca | EXX55_09210 | Not Available | Positive | 1881033 - 1881971 | 34498.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | EXX55_09215 | Not Available | Positive | 1882070 - 1883059 | 35218.5 |
| threonine/serine transporter tdcc | EXX55_09220 | Not Available | Positive | 1883081 - 1884412 | 48881.8 |
| propionate kinase | EXX55_09225 | Not Available | Positive | 1884438 - 1885646 | 43416.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EXX55_09230 | Not Available | Positive | 1885680 - 1887974 | 85982.4 |
| enamine/imine deaminase | EXX55_09235 | Not Available | Positive | 1887988 - 1888377 | 14008.0 |
| l-serine ammonia-lyase | EXX55_09240 | Not Available | Positive | 1888449 - 1889813 | 48529.6 |
| haaap family serine/threonine permease | EXX55_09245 | Not Available | Positive | 1890088 - 1891419 | 48291.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





