Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_57 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1412898 bp
Thymine Count
1419984 bp
Guanine Count
1450503 bp
Cytosine Count
1429266 bp
Genome Length
5726298 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
476 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esct/ysct/hrct family type iii secretion system export apparatus protein | EXX55_06895 | Not Available | Negative | 1389547 - 1390314 | 28182.7 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EXX55_06905 | Not Available | Negative | 1390585 - 1391250 | 24505.4 |
| yscq/hrcq family type iii secretion apparatus protein | EXX55_06910 | Not Available | Negative | 1391240 - 1392187 | 36300.4 |
| effector protein | EXX55_06915 | Not Available | Negative | 1392187 - 1392756 | 22213.1 |
| type iii secretion protein | EXX55_06925 | Not Available | Negative | 1393040 - 1393498 | 18310.4 |
| flii/yscn family atpase | EXX55_06930 | Not Available | Negative | 1393488 - 1394780 | 47573.4 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | EXX55_06935 | Not Available | Negative | 1394812 - 1396872 | 76395.4 |
| yopn family type iii secretion system gatekeeper subunit | EXX55_06940 | Not Available | Negative | 1396865 - 1398010 | 43548.6 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | EXX55_06945 | Not Available | Negative | 1398015 - 1399718 | 62739.4 |
| helix-turn-helix domain-containing protein | EXX55_06950 | Not Available | Negative | 1399715 - 1400464 | 28357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





