Halorubrum sp. ASP121

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. ASP121 is a rod-shaped archaeon notable for its unique adaptations to extreme environments. This organism possesses flagella, which facilitates motility, allowing it to navigate its saline habitat effectively. Halorubrum sp. ASP121 is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its survival in challenging conditions. The organism is cataloged under the accession number SGXX00000000.1, which serves as a reference for its genomic data. This information is crucial for further research and understanding of its genetic and functional attributes. The presence of flagella in Halorubrum sp. ASP121 not only aids in movement but may also play a role in its ecological interactions within its environment. As a member of the Halorubrum genus, it likely thrives in high-salinity niches, contributing to the microbial diversity and functionality of these extreme ecosystems. The adaptations of Halorubrum sp. ASP121, such as its rod shape and motility, reflect its evolutionary strategies to exploit extreme environments, highlighting the significance of such microorganisms in maintaining ecological balance in saline habitats. Their ability to survive and thrive under extreme conditions underscores the importance of microbial life in biogeochemical cycles and ecosystem dynamics.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. ASP121
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. ASP121 NODE_155_length_240_cov_0.000000, whole

Gene Summary

Adenine Count

537162 bp

Thymine Count

543592 bp

Guanine Count

1152121 bp

Cytosine Count

1146322 bp

Genome Length

3390870 bp

Protein-coding Genes

3307 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseEXE49_03720Not AvailableNegative687278 - 68822532592.8
diaminopimelate decarboxylaseEXE49_03725Not AvailableNegative688222 - 68958947767.3
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEXE49_03730Not AvailableNegative689586 - 69042530043.9
4-hydroxy-tetrahydrodipicolinate reductaseEXE49_03735Not AvailableNegative690483 - 69130127799.8
4-hydroxy-tetrahydrodipicolinate synthaseEXE49_03740Not AvailableNegative691298 - 69229935322.9
hd domain-containing proteinEXE49_03745Not AvailablePositive692776 - 69369033312.7
aldehyde dehydrogenase family proteinEXE49_03750Not AvailableNegative693724 - 69530151832.6
tetratricopeptide repeat proteinEXE49_03755Not AvailablePositive695418 - 699086127739.0
pseudouridine synthaseEXE49_03760Not AvailablePositive699137 - 69964617617.3
hypothetical proteinEXE49_03765Not AvailableNegative699961 - 70099535018.5

Displaying genes 771 – 780 of 3374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.