Cupriavidus agavae strain ASC-9842

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus agavae strain ASC-9842 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This trait is significant for its ecological interactions and potential adaptability within various environments. The strain contains a single replicon, indicating a streamlined genetic organization that may contribute to its metabolic efficiency and adaptability. The accession number for Cupriavidus agavae strain ASC-9842 is SGXM00000000.1, which serves as a reference for genomic information and is essential for further studies on its genetics and functional capabilities. Cupriavidus species are often associated with plant environments, and the presence of this strain may suggest a role in plant-microbe interactions or soil ecosystems. The motility conferred by flagella may enhance its ability to colonize plant roots or move within soil matrices, potentially facilitating nutrient acquisition or contributing to biogeochemical cycles. In summary, Cupriavidus agavae strain ASC-9842, with its Gram-negative classification, flagella presence, and single replicon, highlights its potential ecological roles, particularly in plant-associated environments. Further exploration of its biological functions could yield insights into its contributions to microbial diversity and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus agavae
Strainstrain ASC-9842

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus agavae strain ASC-9842 Ga0310579_119, whole genome

Gene Summary

Adenine Count

965650 bp

Thymine Count

966924 bp

Guanine Count

1936197 bp

Cytosine Count

1922521 bp

Genome Length

5792570 bp

Protein-coding Genes

5062 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isocitrate dehydrogenaseEV147_4920Not AvailablePositive5466408 - 546865182574.4
acetyl esterase/lipaseEV147_4921Not AvailableNegative5468731 - 547022752724.1
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinEV147_4922Not AvailableNegative5470371 - 547288492936.4
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinEV147_4923Not AvailableNegative5473149 - 547420739181.0
hypothetical proteinEV147_4924Not AvailablePositive5474277 - 547458511045.1
uncharacterized protein ybaa (duf1428 family)EV147_4925Not AvailablePositive5474681 - 547503413151.6
rubredoxinEV147_4926Not AvailableNegative5475039 - 547545214973.2
d-amino-acid dehydrogenaseEV147_4928Not AvailablePositive5476238 - 547747643582.5
2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductaseEV147_4929Not AvailablePositive5477538 - 547880046864.8
amino acid/amide abc transporter substrate-binding protein (haat family)EV147_4930Not AvailablePositive5478838 - 547998340506.8

Displaying genes 4851 – 4860 of 5126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.