Cupriavidus agavae strain ASC-9842

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus agavae strain ASC-9842 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This trait is significant for its ecological interactions and potential adaptability within various environments. The strain contains a single replicon, indicating a streamlined genetic organization that may contribute to its metabolic efficiency and adaptability. The accession number for Cupriavidus agavae strain ASC-9842 is SGXM00000000.1, which serves as a reference for genomic information and is essential for further studies on its genetics and functional capabilities. Cupriavidus species are often associated with plant environments, and the presence of this strain may suggest a role in plant-microbe interactions or soil ecosystems. The motility conferred by flagella may enhance its ability to colonize plant roots or move within soil matrices, potentially facilitating nutrient acquisition or contributing to biogeochemical cycles. In summary, Cupriavidus agavae strain ASC-9842, with its Gram-negative classification, flagella presence, and single replicon, highlights its potential ecological roles, particularly in plant-associated environments. Further exploration of its biological functions could yield insights into its contributions to microbial diversity and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus agavae
Strainstrain ASC-9842

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus agavae strain ASC-9842 Ga0310579_119, whole genome

Gene Summary

Adenine Count

965650 bp

Thymine Count

966924 bp

Guanine Count

1936197 bp

Cytosine Count

1922521 bp

Genome Length

5792570 bp

Protein-coding Genes

5062 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multidrug efflux pumpEV147_2077Not AvailablePositive2274337 - 2277495113165.0
multidrug efflux pumpEV147_2078Not AvailablePositive2277495 - 2280800117543.0
nodt family efflux transporter outer membrane factor (omf) lipoproteinEV147_2079Not AvailablePositive2280800 - 228228452169.3
uncharacterized protein duf4440EV147_2080Not AvailableNegative2282417 - 228279113912.3
dna-binding transcriptional lysr family regulatorEV147_2081Not AvailableNegative2282921 - 228381733271.2
putative membrane proteinEV147_2082Not AvailablePositive2283964 - 228442817141.0
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)EV147_2083Not AvailablePositive2284527 - 228617358019.0
translation factor sua5EV147_2084Not AvailableNegative2286254 - 228724634742.3
5-(carboxyamino)imidazole ribonucleotide synthaseEV147_2085Not AvailableNegative2287257 - 228850144591.0
5-(carboxyamino)imidazole ribonucleotide mutaseEV147_2086Not AvailableNegative2288559 - 228905616846.6

Displaying genes 2061 – 2070 of 5126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.