Aquimarina brevivitae strain DSM 17196

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina brevivitae strain DSM 17196 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain exhibits motility, which may play a role in its ecological interactions and adaptation to various environments. As a mesophilic organism, A. brevivitae thrives optimally at a temperature of 37°C, indicating its potential prevalence in warm-blooded hosts or environments that maintain similar thermal conditions. The genetic makeup of A. brevivitae includes a single replicon, reflecting a relatively simple genomic structure. This feature may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. Notably, A. brevivitae is non-spore-forming, which suggests that it relies on active growth and reproduction rather than sporulation for survival and propagation. In terms of its ecological role, the motility of A. brevivitae may enhance its ability to colonize specific niches and respond to environmental changes. Its aerobic nature indicates a reliance on oxygen for metabolic processes, which positions it within ecosystems where oxygen availability is sufficient. Understanding the traits of A. brevivitae, especially its growth requirements and mobility, can provide insights into its potential applications in biotechnological processes or its role in marine ecosystems, where such bacteria often contribute to nutrient cycling and organic matter decomposition. The strain is cataloged under accession number SGXE00000000.1, which aids in its identification and study within microbiological research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina brevivitae
Strainstrain DSM 17196

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina brevivitae strain DSM 17196 Ga0310459_112, whole genome

Gene Summary

Adenine Count

1242318 bp

Thymine Count

1249847 bp

Guanine Count

693726 bp

Cytosine Count

694299 bp

Genome Length

3881522 bp

Protein-coding Genes

3417 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
manganese/zinc/iron transport system atp- binding proteinEV197_1520Not AvailableNegative1658071 - 165880827166.2
manganese/zinc/iron transport system substrate-binding proteinEV197_1521Not AvailableNegative1658808 - 165972233598.2
outer membrane putative beta-barrel porin/alpha-amylaseEV197_1522Not AvailableNegative1659731 - 166052228799.1
dtxr family iron (metal) dependent repressorEV197_1523Not AvailablePositive1660574 - 166126326477.7
dna polymerase-3 subunit epsilonEV197_1524Not AvailablePositive1661337 - 166211629334.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayEV197_1525Not AvailablePositive1662125 - 166273623302.1
hpt (histidine-containing phosphotransfer) domain-containing proteinEV197_1526Not AvailablePositive1662737 - 166307512542.9
nicotinamide-nucleotide amidaseEV197_1527Not AvailablePositive1663095 - 166435745939.6
hypothetical proteinEV197_1528Not AvailableNegative1664389 - 166479015394.3
lsu ribosomal protein l28pEV197_1529Not AvailablePositive1665214 - 16654538896.06

Displaying genes 1521 – 1530 of 3482 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.