Aquimarina brevivitae strain DSM 17196

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina brevivitae strain DSM 17196 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain exhibits motility, which may play a role in its ecological interactions and adaptation to various environments. As a mesophilic organism, A. brevivitae thrives optimally at a temperature of 37°C, indicating its potential prevalence in warm-blooded hosts or environments that maintain similar thermal conditions. The genetic makeup of A. brevivitae includes a single replicon, reflecting a relatively simple genomic structure. This feature may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. Notably, A. brevivitae is non-spore-forming, which suggests that it relies on active growth and reproduction rather than sporulation for survival and propagation. In terms of its ecological role, the motility of A. brevivitae may enhance its ability to colonize specific niches and respond to environmental changes. Its aerobic nature indicates a reliance on oxygen for metabolic processes, which positions it within ecosystems where oxygen availability is sufficient. Understanding the traits of A. brevivitae, especially its growth requirements and mobility, can provide insights into its potential applications in biotechnological processes or its role in marine ecosystems, where such bacteria often contribute to nutrient cycling and organic matter decomposition. The strain is cataloged under accession number SGXE00000000.1, which aids in its identification and study within microbiological research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina brevivitae
Strainstrain DSM 17196

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina brevivitae strain DSM 17196 Ga0310459_112, whole genome

Gene Summary

Adenine Count

1242318 bp

Thymine Count

1249847 bp

Guanine Count

693726 bp

Cytosine Count

694299 bp

Genome Length

3881522 bp

Protein-coding Genes

3417 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-oxoadipyl-coa thiolaseEV197_1108Not AvailablePositive1250867 - 125207542968.4
oxepin-coa hydrolase/3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseEV197_1109Not AvailablePositive1252186 - 125468492862.5
methylglutaconyl-coa hydrataseEV197_1110Not AvailablePositive1254786 - 125553827133.6
phenylacetic acid degradation proteinEV197_1112Not AvailablePositive1256002 - 125660121818.3
duf3050 family proteinEV197_1113Not AvailablePositive1256611 - 125739330061.3
2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase)EV197_1114Not AvailablePositive1257489 - 125880548174.9
Ncrna_class:otherNot AvailableNot AvailablePositive1258838 - 1258938Not Available
branched-chain amino acid aminotransferaseEV197_1116Not AvailablePositive1258970 - 126004339736.9
2-oxoisovalerate dehydrogenase e1 componentEV197_1117Not AvailablePositive1260096 - 126216576652.6
hypothetical proteinEV197_1118Not AvailableNegative1262361 - 126296622625.8

Displaying genes 1111 – 1120 of 3482 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.