Pigmentiphaga kullae strain K24

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Pigmentiphaga

Description

Pigmentiphaga kullae strain K24 is a Gram-negative, rod-shaped bacterium characterized by its non-spore-forming capability. This strain possesses a single replicon, indicating a streamlined genetic organization. The accession number for this bacterium is SGXC00000000.1, which allows for its identification and access to genomic data. As a member of the genus Pigmentiphaga, this strain may play a role in various ecological processes, particularly in environments where organic matter degradation is vital. The Gram-negative nature of Pigmentiphaga kullae suggests it may have an outer membrane that could contribute to its interactions with other microorganisms and its environment. Furthermore, the absence of sporulation indicates that this bacterium relies on other survival strategies to withstand environmental stresses. The specific traits of Pigmentiphaga kullae strain K24, particularly its rod shape and non-spore-forming characteristic, suggest it may be adapted to specific ecological niches where rapid growth and reproduction are advantageous. The presence of a single replicon may also reflect a genetic efficiency that could be beneficial in fluctuating environments. Understanding the ecological role of this bacterium can provide insights into its contribution to biogeochemical cycles and its potential applications in bioremediation or other microbiological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusPigmentiphaga
SpeciesPigmentiphaga kullae
Strainstrain K24

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pigmentiphaga kullae strain K24 Ga0310531_15, whole genome shotgun

Gene Summary

Adenine Count

1005053 bp

Thymine Count

1013287 bp

Guanine Count

2129526 bp

Cytosine Count

2072412 bp

Genome Length

6220570 bp

Protein-coding Genes

5759 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic-ring opening dioxygenase ligab liga subunitEV675_0043Not AvailablePositive43193 - 4349811163.4
protocatechuate 4,5-dioxygenase beta chain/2,3-dihydroxyphenylpropionate 1,2-dioxygenaseEV675_0044Not AvailablePositive43499 - 4432328871.7
abc-type nitrate/sulfonate/bicarbonate transport system substrate-binding proteinEV675_0045Not AvailablePositive44320 - 4521332044.6
3-oxoacyl-[acyl-carrier protein] reductaseEV675_0046Not AvailablePositive45253 - 4602626849.3
marr family transcriptional regulatorEV675_0047Not AvailableNegative46051 - 4650617353.2
aconitaseEV675_0048Not AvailableNegative46643 - 4922893045.0
cubico group peptidase (beta-lactamase class c family)EV675_0049Not AvailablePositive49398 - 5127867328.3
lysr family tcuabc transcriptional regulatorEV675_0050Not AvailablePositive51286 - 5221533607.9
tricarballylate dehydrogenaseEV675_0051Not AvailablePositive52293 - 5371451687.8
citrate/tricarballylate utilization proteinEV675_0052Not AvailablePositive53701 - 5491843737.4

Displaying genes 161 – 170 of 5889 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.