Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii/iv secretion system protein | EV673_3098 | Not Available | Positive | 3373566 - 3374519 | 34630.2 |
| type ii secretory pathway component pulf | EV673_3099 | Not Available | Positive | 3374516 - 3375553 | 38364.9 |
| hypothetical protein | EV673_3100 | Not Available | Positive | 3375550 - 3376431 | 33255.7 |
| hypothetical protein | EV673_3101 | Not Available | Positive | 3376428 - 3377003 | 21070.3 |
| hypothetical protein | EV673_3102 | Not Available | Positive | 3377000 - 3378139 | 41702.4 |
| hypothetical protein | EV673_3103 | Not Available | Positive | 3378136 - 3378903 | 27824.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EV673_3104 | Not Available | Positive | 3378905 - 3379543 | 22090.0 |
| kef-type potassium/proton antiporter (cpa2 family) | EV673_3105 | Not Available | Negative | 3379581 - 3381581 | 72012.2 |
| arabinose-5-phosphate isomerase | EV673_3106 | Not Available | Positive | 3381686 - 3382678 | 34651.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | EV673_3107 | Not Available | Positive | 3382678 - 3383217 | 20201.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
