Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | EV673_2530 | Not Available | Positive | 2750465 - 2751043 | 20954.6 |
| phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylase | EV673_2531 | Not Available | Positive | 2751056 - 2752288 | 43747.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | EV673_2532 | Not Available | Positive | 2752303 - 2752755 | 16061.5 |
| diguanylate cyclase (ggdef)-like protein | EV673_2533 | Not Available | Positive | 2752814 - 2753959 | 42750.6 |
| atp-dependent clp protease atp-binding subunit clpa | EV673_2534 | Not Available | Negative | 2754017 - 2756341 | 85191.1 |
| atp-dependent clp protease adaptor protein clps | EV673_2535 | Not Available | Negative | 2756338 - 2756697 | 13429.5 |
| putative cold-shock dna-binding protein | EV673_2536 | Not Available | Positive | 2756987 - 2757208 | 7773.11 |
| isocitrate dehydrogenase (nadp) | EV673_2537 | Not Available | Negative | 2757372 - 2758619 | 45504.1 |
| hypothetical protein | EV673_2538 | Not Available | Positive | 2758781 - 2759269 | 17659.7 |
| fe-mn family superoxide dismutase | EV673_2539 | Not Available | Negative | 2759367 - 2759948 | 21492.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
