Limnobacter thiooxidans strain DSM 13612

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Limnobacter

Description

Limnobacter thiooxidans strain DSM 13612 is a Gram-negative, aerobic bacterium characterized as an autotroph, lithotroph, and chemotroph. This means that it derives its energy from inorganic compounds, specifically through the oxidation of sulfur. The rod-shaped morphology of this strain facilitates its adaptation to various environments, where it can thrive in the presence of oxygen. The organism is notable for having a single replicon, which is a significant aspect of its genomic structure, as it suggests a streamlined genetic organization that may contribute to its metabolic efficiency. The genetic information for Limnobacter thiooxidans is cataloged under the accession number SGWT00000000.1, indicating its availability for further study and analysis in microbial databases. Ecologically, Limnobacter thiooxidans plays an important role in sulfur cycling within its habitat. By oxidizing sulfur compounds, this bacterium can contribute to the formation of sulfate, which is a vital nutrient for various organisms in its ecosystem. This process not only aids in the recycling of nutrients but also helps maintain the balance of sulfur compounds within the environment. The ability of Limnobacter thiooxidans to thrive in aerobic conditions while utilizing inorganic sulfur compounds underscores its significance in biogeochemical cycles, particularly in sulfur-rich environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusLimnobacter
SpeciesLimnobacter thiooxidans
Strainstrain DSM 13612

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceautotroph; lithotroph; chemotroph
PathogenicityNot Available

Genome Summary

Limnobacter thiooxidans strain DSM 13612 Ga0310520_16, whole

Gene Summary

Adenine Count

827258 bp

Thymine Count

827624 bp

Guanine Count

941287 bp

Cytosine Count

937341 bp

Genome Length

3534063 bp

Protein-coding Genes

3187 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex outermembrane receptor proteinEV673_2338Not AvailableNegative2540260 - 254280692884.8
abc-type nitrate/sulfonate/bicarbonate transport system substrate-binding proteinEV673_2339Not AvailablePositive2543062 - 254412939782.2
class ii aldolase/adducin n-terminal domain-containing proteinEV673_2340Not AvailablePositive2544163 - 254483124692.3
fmn-dependent oxidoreductase (nitrilotriacetate monooxygenase family)EV673_2341Not AvailablePositive2544844 - 254619650598.1
atp-binding cassette subfamily b protein/subfamily b atp-binding cassette protein msbaEV673_2342Not AvailablePositive2546274 - 254804665389.6
fucose permeaseEV673_2343Not AvailablePositive2548063 - 254923542891.9
nitroreductaseEV673_2344Not AvailableNegative2549220 - 254981922255.2
peptide/nickel transport system substrate-binding protein/microcin c transport system substrate-binding proteinEV673_2345Not AvailableNegative2549822 - 255167270313.6
microcin c transport system atp-binding proteinEV673_2346Not AvailableNegative2551680 - 255326958796.6
microcin c transport system permease proteinEV673_2347Not AvailableNegative2553266 - 255434840150.9

Displaying genes 2331 – 2340 of 3236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.