Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccsb | EV673_2037 | Not Available | Positive | 2204414 - 2205754 | 49386.9 |
| diaminopimelate decarboxylase | EV673_2038 | Not Available | Negative | 2205831 - 2207138 | 47036.8 |
| cyay protein | EV673_2039 | Not Available | Positive | 2207292 - 2207648 | 13196.7 |
| penicillin-binding protein 1a | EV673_2040 | Not Available | Negative | 2207667 - 2210213 | 92907.9 |
| hypothetical protein | EV673_2041 | Not Available | Positive | 2210330 - 2211298 | 35596.8 |
| tfp pilus assembly protein piln | EV673_2042 | Not Available | Positive | 2211289 - 2211867 | 21351.9 |
| tfp pilus assembly protein pilo | EV673_2043 | Not Available | Positive | 2211854 - 2212474 | 22978.0 |
| tfp pilus assembly protein pilp | EV673_2044 | Not Available | Positive | 2212471 - 2212965 | 17734.6 |
| type iv pilus assembly protein pilq | EV673_2045 | Not Available | Positive | 2212965 - 2215043 | 75151.0 |
| shikimate kinase | EV673_2046 | Not Available | Positive | 2215126 - 2215650 | 19217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
