Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen fixation/metabolism regulation signal transduction histidine kinase | EV673_1574 | Not Available | Negative | 1715855 - 1718128 | 83448.9 |
| uncharacterized protein duf4390 | EV673_1575 | Not Available | Negative | 1718125 - 1718742 | 23676.6 |
| 16s rrna (cytosine967-c5)-methyltransferase | EV673_1576 | Not Available | Negative | 1718752 - 1720116 | 49098.0 |
| methionyl-trna formyltransferase | EV673_1577 | Not Available | Negative | 1720212 - 1721183 | 34063.7 |
| peptide deformylase | EV673_1578 | Not Available | Negative | 1721198 - 1721707 | 18930.9 |
| dna protecting protein dpra | EV673_1579 | Not Available | Positive | 1721789 - 1722886 | 38922.6 |
| dna topoisomerase-3 | EV673_1580 | Not Available | Positive | 1723008 - 1725626 | 96498.5 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | EV673_1581 | Not Available | Negative | 1725646 - 1727091 | 52423.7 |
| hypothetical protein | EV673_1582 | Not Available | Positive | 1727201 - 1727632 | 15012.0 |
| hypothetical protein | EV673_1583 | Not Available | Positive | 1727643 - 1728068 | 14511.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
