Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hsp15 | EV673_1494 | Not Available | Negative | 1627945 - 1628400 | 16934.3 |
| tartrate dehydrogenase/decarboxylase/d-malate dehydrogenase | EV673_1495 | Not Available | Positive | 1628514 - 1629629 | 40724.1 |
| hypothetical protein | EV673_1496 | Not Available | Negative | 1629667 - 1630347 | 24909.1 |
| caspase domain-containing protein | EV673_1497 | Not Available | Negative | 1630464 - 1632008 | 55002.7 |
| type vi secretion system protein vasg | EV673_1498 | Not Available | Negative | 1631977 - 1634691 | 99015.0 |
| type vi secretion system protein imph | EV673_1499 | Not Available | Negative | 1634688 - 1635692 | 37454.2 |
| type vi secretion system protein impg | EV673_1500 | Not Available | Negative | 1635708 - 1637573 | 67978.1 |
| type vi secretion system protein impf | EV673_1501 | Not Available | Negative | 1637597 - 1638100 | 18845.0 |
| type vi secretion system secreted protein hcp | EV673_1502 | Not Available | Negative | 1638093 - 1638575 | 17123.4 |
| type vi secretion system secreted protein hcp | EV673_1503 | Not Available | Negative | 1638596 - 1639078 | 17167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
