Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Limnobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Limnobacter |
| Species | Limnobacter thiooxidans |
| Strain | strain DSM 13612 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | autotroph; lithotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827258 bp
Thymine Count
827624 bp
Guanine Count
941287 bp
Cytosine Count
937341 bp
Genome Length
3534063 bp
Protein-coding Genes
3187 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein d (gspd) | EV673_1464 | Not Available | Positive | 1592280 - 1594652 | 83136.2 |
| type ii secretion system protein e (gspe) | EV673_1465 | Not Available | Positive | 1594649 - 1596112 | 53862.5 |
| type ii secretion system protein f (gspf) | EV673_1466 | Not Available | Positive | 1596131 - 1597345 | 43532.2 |
| luxr family two component transcriptional regulator | EV673_1467 | Not Available | Positive | 1597342 - 1598070 | 26246.6 |
| luxr family two component transcriptional regulator | EV673_1468 | Not Available | Positive | 1598172 - 1598885 | 25976.2 |
| signal transduction histidine kinase | EV673_1469 | Not Available | Positive | 1598885 - 1600795 | 72366.2 |
| hydroxymethylglutaryl-coa lyase | EV673_1470 | Not Available | Negative | 1600810 - 1601736 | 32478.3 |
| 3-methylcrotonoyl-coa carboxylase alpha subunit | EV673_1471 | Not Available | Negative | 1601745 - 1603802 | 73807.2 |
| methylglutaconyl-coa hydratase | EV673_1472 | Not Available | Negative | 1603822 - 1604625 | 28565.7 |
| 3-methylcrotonyl-coa carboxylase beta subunit | EV673_1473 | Not Available | Negative | 1604686 - 1606296 | 57437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
